STRINGSTRING
Nmar_0090 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0090" - PFAM: ABC transporter related in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0090PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- tvo-TVN1367 ABC transport system ATP-binding protein (312 aa)    
Predicted Functional Partners:
Nmar_0091
PFAM- ABC-2 type transporter; KEGG- tvo-TVN1368 ABC-2 integral membrane protein (253 aa)
 
 
  0.931
Nmar_0476
PFAM- ABC-2 type transporter; KEGG- mth-MTH1092 ABC-2 type transport system permease protein (261 aa)
 
  0.660
Nmar_0610
PFAM- restriction modification system DNA specificity domain; putative RNA methylase; N-6 DNA methylase; Methyltransferase type 11; KEGG- fta-FTA_1029 hypothetical protein (730 aa)
         
  0.592
Nmar_0089
PFAM- nucleic acid binding OB-fold tRNA/helicase-type; KEGG- mmp-MMP1032 replication protein A (466 aa)
              0.514
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (251 aa)
   
      0.489
dnaK
Chaperone protein DnaK; Acts as a chaperone (636 aa)
 
     
  0.467
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (513 aa)
 
        0.465
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family (412 aa)
 
 
  0.448
srp54
Signal recognition particle 54 kDa protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY; Belongs to the GTP-binding SRP family. SRP54 subfamily (442 aa)
 
        0.443
Nmar_0347
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1115 aa)
   
   
  0.425
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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