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Nmar_0101 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0101" - KEGG: afu:AF1297 cell division control protein 48, AAA family in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nmar_0101KEGG- afu-AF1297 cell division control protein 48, AAA family (cdc48-1); TIGRFAM- AAA family ATPase, CDC48 subfamily; PFAM- AAA ATPase VAT domain protein; AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; SMART- AAA ATPase (722 aa)    
Predicted Functional Partners:
gatE
Glutamyl-tRNA(Gln) amidotransferase subunit E; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate (634 aa)
 
          0.775
gatD
Glutamyl-tRNA(Gln) amidotransferase subunit D; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate (429 aa)
   
      0.762
rpl2
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (244 aa)
 
 
      0.729
rpoA2
DNA-directed RNA polymerase subunit A’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1263 aa)
 
 
  0.562
Nmar_0103
PFAM- acylphosphatase; KEGG- pas-Pars_0300 acylphosphatase (92 aa)
              0.486
Nmar_0610
PFAM- restriction modification system DNA specificity domain; putative RNA methylase; N-6 DNA methylase; Methyltransferase type 11; KEGG- fta-FTA_1029 hypothetical protein (730 aa)
              0.485
Nmar_1314
Proteasome endopeptidase complex; PFAM- 20S proteasome A and B subunits; KEGG- afu-AF0490 proteasome, subunit alpha (240 aa)
   
 
  0.471
Nmar_0811
Proteasome endopeptidase complex; PFAM- 20S proteasome A and B subunits; KEGG- afu-AF0490 proteasome, subunit alpha (245 aa)
   
 
  0.471
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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