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Nmar_0111 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0111" - PFAM: protein of unknown function UPF0047 in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0111PFAM- protein of unknown function UPF0047; KEGG- noc-Noc_1152 hypothetical protein (150 aa)    
Predicted Functional Partners:
Nmar_0110
annotation not available (137 aa)
              0.576
Nmar_0312
PFAM- Polyprenyl synthetase; KEGG- mka-MK0774 geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family (326 aa)
   
        0.545
Nmar_0314
PFAM- aspartate/glutamate/uridylate kinase; KEGG- pho-PH1623 hypothetical protein (247 aa)
              0.537
pelA
Protein pelota homolog; May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity (349 aa)
              0.512
Nmar_1309
PFAM- CoA-binding domain protein; ATP-grasp domain protein; KEGG- mem-Memar_2327 CoA-binding domain protein (705 aa)
              0.511
Nmar_1751
Tyrosine--tRNA ligase; TIGRFAM- tyrosyl-tRNA synthetase; PFAM- aminoacyl-tRNA synthetase class Ib; KEGG- tko-TK0568 tyrosyl-tRNA synthetase (348 aa)
              0.481
dnaG
DNA primase DnaG; SMART- Toprim sub domain protein; KEGG- sso-SSO0079 Bacterial-like DNA primase (380 aa)
              0.481
Nmar_1267
PFAM- dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; KEGG- rrs-RoseRS_0064 methionine synthase (832 aa)
   
        0.442
pyrI
Aspartate carbamoyltransferase regulatory chain; Involved in allosteric regulation of aspartate carbamoyltransferase (153 aa)
              0.406
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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