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Nmar_0115 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0115" - PFAM: Radical SAM domain protein in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nmar_0115PFAM- Radical SAM domain protein; KEGG- afu-AF2316 hypothetical protein (559 aa)    
Predicted Functional Partners:
Nmar_0114
PFAM- transcriptional regulator TrmB; KEGG- mma-MM_0146 transcriptional regulator (255 aa)
 
          0.683
Nmar_0116
PFAM- glycosyl transferase group 1; KEGG- tpe-Tpen_1746 glycosyl transferase, group 1 (341 aa)
              0.674
Nmar_0113
Iron (Metal) dependent repressor, DtxR family; PFAM- iron dependent repressor; KEGG- hal-VNG0536G transcription repressor (150 aa)
              0.596
albA
DNA/RNA-binding protein Alba; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family (95 aa)
   
          0.561
Nmar_0117
Polysaccharide biosynthesis protein CapD; PFAM- NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG- mja-MJ1061 capsular polysaccharide biosynthesis protein D (335 aa)
              0.543
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (201 aa)
              0.539
rpl30
PFAM- ribosomal protein L30; KEGG- smr-Smar_1040 ribosomal protein L30P (155 aa)
   
          0.530
Nmar_0307
PFAM- Protein of unknown function UPF0147; KEGG- hbu-Hbut_1631 hypothetical protein; Belongs to the UPF0147 family (89 aa)
   
          0.519
Nmar_1366
Methyltransferase type 11; PFAM- protein of unknown function DUF343; Methyltransferase type 11 (288 aa)
              0.512
Nmar_0112
annotation not available (54 aa)
              0.512
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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