STRINGSTRING
Nmar_0127 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0127" - PFAM: Carbamoyltransferase in Nitrosopumilus maritimus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0127PFAM- Carbamoyltransferase; KEGG- pmm-PMM1251 carbamoyltransferase (567 aa)    
Predicted Functional Partners:
Nmar_0126
PFAM- lipolytic protein G-D-S-L family; KEGG- pmi-PMT9312_0312 hypothetical protein (393 aa)
 
          0.879
Nmar_0129
annotation not available (50 aa)
              0.845
Nmar_0128
annotation not available (115 aa)
              0.845
Nmar_0130
annotation not available (257 aa)
              0.512
Nmar_0131
PFAM- N-acetylneuraminic acid synthase domain; KEGG- mgm-Mmc1_2407 N-acetylneuraminic acid synthase, N-terminal domain (351 aa)
              0.425
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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