STRINGSTRING
Nmar_0140 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0140" - PFAM: pyruvate carboxyltransferase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0140PFAM- pyruvate carboxyltransferase; KEGG- mla-Mlab_0987 hypothetical protein (352 aa)    
Predicted Functional Partners:
Nmar_0141
PFAM- AMP-dependent synthetase and ligase; KEGG- bce-BC1088 acyl-CoA synthase (485 aa)
   
  0.947
leuC
3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (422 aa)
 
 
  0.688
Nmar_0422
KEGG- sth-STH2116 3-isopropylmalate dehydratase large subunit; TIGRFAM- 3-isopropylmalate dehydratase, large subunit; PFAM- aconitate hydratase domain protein (471 aa)
   
 
  0.642
Nmar_0142
PFAM- cyclase family protein; KEGG- mla-Mlab_0986 hypothetical protein (214 aa)
     
      0.634
Nmar_0139
Uncharacterized protein; KEGG- wbr-WGLp128 glycerol-3-phosphate O-acyltransferase (605 aa)
   
   
  0.612
Nmar_1634
PFAM- 4-oxalocrotonate tautomerase (58 aa)
           
  0.600
Nmar_1008
D-alanine--D-alanine ligase; PFAM- peptidase M20; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; KEGG- amt-Amet_3744 D-alanine--D-alanine ligase domain protein (743 aa)
   
   
  0.598
Nmar_0546
Aminotransferase; PFAM- Chorismate mutase; aminotransferase class I and II; KEGG- tpt-Tpet_1516 aminotransferase, class I and II (456 aa)
   
   
  0.597
Nmar_1379
PFAM- isocitrate/isopropylmalate dehydrogenase; KEGG- mma-MM_1003 isocitrate dehydrogenase [NADP] (343 aa)
   
 
  0.574
Nmar_1069
KEGG- sso-SSO0723 3-isopropylmalate dehydrogenase; TIGRFAM- isopropylmalate/isohomocitrate dehydrogenase; PFAM- isocitrate/isopropylmalate dehydrogenase (337 aa)
   
 
  0.574
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (15%) [HD]