STRINGSTRING
Nmar_0148 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0148" - PFAM: aminotransferase class-III in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0148PFAM- aminotransferase class-III; KEGG- swo-Swol_0203 aminotransferase, class III pyridoxal-phosphate dependent; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (442 aa)    
Predicted Functional Partners:
Nmar_0510
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA); Belongs to the glutamyl-tRNA reductase family (421 aa)
 
  0.973
Nmar_0265
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA); Belongs to the glutamyl-tRNA reductase family (358 aa)
 
  0.971
Nmar_0509
PFAM- delta-aminolevulinic acid dehydratase; KEGG- bld-BLi02943 delta-aminolevulinic acid dehydratase; RBL00019; Belongs to the ALAD family (326 aa)
 
 
  0.963
Nmar_0135
PFAM- acylneuraminate cytidylyltransferase; KEGG- swo-Swol_0201 hypothetical protein (252 aa)
          0.915
Nmar_0147
annotation not available (431 aa)
              0.845
Nmar_1017
PFAM- aminotransferase class-III; KEGG- hbu-Hbut_1430 glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (435 aa)
   
   
 
0.837
hemL
TIGRFAM- glutamate-1-semialdehyde-2,1-aminomutase; PFAM- aminotransferase class-III; KEGG- mja-MJ0603 glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily (424 aa)
   
   
 
0.833
Nmar_0145
annotation not available (151 aa)
         
  0.622
Nmar_0493
PFAM- Uroporphyrinogen III synthase HEM4; KEGG- sat-SYN_02272 uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase (267 aa)
 
 
  0.603
Nmar_0146
Polysaccharide biosynthesis protein CapD; PFAM- NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG- mbu-Mbur_1591 polysaccharide biosynthesis protein CapD (329 aa)
              0.601
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (14%) [HD]