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gmd protein (Nitrosopumilus maritimus) - STRING interaction network
"gmd" - GDP-mannose 4,6-dehydratase in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (327 aa)    
Predicted Functional Partners:
Nmar_0541
PFAM- Nucleotidyl transferase; KEGG- cth-Cthe_1079 nucleotidyl transferase (238 aa)
       
  0.915
Nmar_0424
PFAM- Nucleotidyl transferase; KEGG- pho-PH1022 putative mannose-1-phosphate guanylyltransferase (239 aa)
       
  0.915
Nmar_0149
PFAM- acylneuraminate cytidylyltransferase; KEGG- msi-Msm_1537 predicted acylneuraminate cytidylyltransferase, NeuS (247 aa)
         
  0.862
Nmar_1023
PFAM- Cupin 2 conserved barrel domain protein; KEGG- ava-Ava_C0104 cupin (120 aa)
   
 
  0.625
Nmar_0299
PFAM- ribulose-phosphate 3-epimerase; Transketolase domain protein; KEGG- pth-PTH_2750 transketolase, N-terminal subunit (555 aa)
              0.571
Nmar_0145
annotation not available (151 aa)
   
   
  0.492
Nmar_0124
TIGRFAM- glucose-1-phosphate thymidyltransferase; PFAM- transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG- mst-Msp_1102 predicted dTDP-glucose pyrophosphorylase (351 aa)
         
  0.474
Nmar_0121
PFAM- NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG- cbe-Cbei_4712 NAD-dependent epimerase/dehydratase (295 aa)
   
 
  0.445
Nmar_0123
PFAM- glycosyl transferase family 2; KEGG- mac-MA2170 glycosyltransferase (346 aa)
   
   
  0.431
Nmar_0122
PFAM- NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG- csc-Csac_1597 NAD-dependent epimerase/dehydratase (314 aa)
 
 
0.415
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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