STRINGSTRING
Nmar_0190 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0190" - PFAM: Methyltransferase type 11 in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0190PFAM- Methyltransferase type 11; Methyltransferase type 12; KEGG- chu-CHU_2762 conserved hypothetical protein; possible methyltransferase (184 aa)    
Predicted Functional Partners:
Nmar_0191
annotation not available (53 aa)
              0.720
Nmar_0192
Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family (304 aa)
   
      0.634
Nmar_1719
PFAM- Protein of unknown function DUF137; KEGG- smr-Smar_1379 protein of unknown function DUF137 (254 aa)
 
          0.575
Nmar_1718
PFAM- GHMP kinase; KEGG- msi-Msm_0060 predicted kinase (GHMP kinase family) (303 aa)
 
          0.552
fen
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. Binds the unpaired 3’-DNA end and kinks the DNA to facilitate 5’ cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] (340 aa)
     
 
  0.490
hel308
ATP-dependent DNA helicase Hel308; DNA-dependent ATPase and 3’-5’ DNA helicase that may be involved in repair of stalled replication forks (709 aa)
              0.430
Nmar_1432
PFAM- Transcription factor CBF/NF-Y/histone domain protein; KEGG- mae-Maeo_1305 transcription factor CBF/NF-Y histone (78 aa)
       
 
  0.427
Nmar_0964
KEGG- sto-ST0342 adenosylhomocysteinase; TIGRFAM- adenosylhomocysteinase; PFAM- S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding (413 aa)
 
 
  0.414
Nmar_1366
Methyltransferase type 11; PFAM- protein of unknown function DUF343; Methyltransferase type 11 (288 aa)
 
 
      0.405
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (11%) [HD]