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Nmar_0204 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0204" - annotation not available in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0204annotation not available (147 aa)    
Predicted Functional Partners:
Nmar_0205
PFAM- ribonuclease H; KEGG- mbn-Mboo_1556 ribonuclease H (118 aa)
              0.848
Nmar_0203
annotation not available (94 aa)
              0.723
Nmar_0202
Transcriptional regulator, ArsR family; PFAM- regulatory protein ArsR; KEGG- mth-MTH1438 hypothetical protein (100 aa)
              0.654
Nmar_0206
PFAM- CoA-binding domain protein; KEGG- rci-RCIX831 acetyl-CoA synthetase (ADP-forming), alpha and beta subunit fusion (698 aa)
              0.642
Nmar_0207
Vinylacetyl-CoA Delta-isomerase; PFAM- 4-hydroxyphenylacetate 3-hydroxylase; KEGG- pgi-PG0692 putative gamma-aminobutyrate metabolism dehydratase/isomerase (508 aa)
              0.479
Nmar_0201
PFAM- Radical SAM domain protein; SMART- Elongator protein 3/MiaB/NifB; KEGG- cdf-CD2227 putative radical SAM superfamily lipoprotein (293 aa)
              0.476
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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