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Nmar_0208 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0208" - TIGRFAM: peptidase S26B, signal peptidase in Nitrosopumilus maritimus
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
Nmar_0208TIGRFAM- peptidase S26B, signal peptidase; PFAM- peptidase S24 and S26 domain protein; KEGG- mka-MK1031 type I signal peptidase (236 aa)    
Predicted Functional Partners:
Nmar_0209
annotation not available (256 aa)
              0.716
Nmar_1627
Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen (884 aa)
 
        0.665
Nmar_0299
PFAM- ribulose-phosphate 3-epimerase; Transketolase domain protein; KEGG- pth-PTH_2750 transketolase, N-terminal subunit (555 aa)
 
   
  0.617
Nmar_0210
TIGRFAM- thioredoxin; PFAM- Thioredoxin domain; KEGG- sth-STH2404 thioredoxin (108 aa)
   
 
  0.567
rpoK
DNA-directed RNA polymerase subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (182 aa)
 
     
  0.561
polB
DNA polymerase II small subunit; Possesses two activities- a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3’ to 5’ direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase; Belongs to the DNA polymerase delta/II small subunit family (481 aa)
   
        0.550
Nmar_1008
D-alanine--D-alanine ligase; PFAM- peptidase M20; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; KEGG- amt-Amet_3744 D-alanine--D-alanine ligase domain protein (743 aa)
   
   
  0.549
Nmar_0075
Dolichyl-diphosphooligosaccharide--protein glycotransferase; PFAM- Oligosaccharyl transferase STT3 subunit; KEGG- ddi-DDB_0230191 oligosaccharyl transferase, STT3 subunit (712 aa)
   
   
  0.544
argS
KEGG- aba-Acid345_2032 arginine--tRNA ligase; TIGRFAM- arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (628 aa)
   
   
  0.538
srp54
Signal recognition particle 54 kDa protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY; Belongs to the GTP-binding SRP family. SRP54 subfamily (442 aa)
   
   
  0.515
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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