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albA protein (Nitrosopumilus maritimus) - STRING interaction network
"albA" - DNA/RNA-binding protein Alba in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
albADNA/RNA-binding protein Alba; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family (95 aa)    
Predicted Functional Partners:
rpl30
PFAM- ribosomal protein L30; KEGG- smr-Smar_1040 ribosomal protein L30P (155 aa)
   
          0.608
Nmar_0254
KEGG- mba-Mbar_A1826 hypothetical protein (178 aa)
              0.589
Nmar_1779
UPF0201 protein Nmar_1779; PFAM- Protein of unknown function DUF54; KEGG- mth-MTH433 hypothetical protein; Belongs to the UPF0201 family (134 aa)
   
     
  0.579
Nmar_0307
PFAM- Protein of unknown function UPF0147; KEGG- hbu-Hbut_1631 hypothetical protein; Belongs to the UPF0147 family (89 aa)
   
          0.579
Nmar_1432
PFAM- Transcription factor CBF/NF-Y/histone domain protein; KEGG- mae-Maeo_1305 transcription factor CBF/NF-Y histone (78 aa)
   
     
  0.571
nop10
Ribosome biogenesis protein Nop10; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA (51 aa)
   
          0.571
Nmar_0115
PFAM- Radical SAM domain protein; KEGG- afu-AF2316 hypothetical protein (559 aa)
   
          0.561
rpl21e
PFAM- Ribosomal protein L21e; KEGG- hbu-Hbut_1660 50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family (99 aa)
   
          0.530
Nmar_0336
PFAM- Radical SAM domain protein; SMART- Elongator protein 3/MiaB/NifB; KEGG- mka-MK1429 Fe-S oxidoreductase (526 aa)
   
          0.527
adkA
KEGG- mja-MJ0479 adenylate kinase; Belongs to the archaeal adenylate kinase family (192 aa)
   
          0.522
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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