STRINGSTRING
Nmar_0260 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0260" - KEGG: mse:Msed_1112 hypothetical protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0260KEGG- mse-Msed_1112 hypothetical protein (114 aa)    
Predicted Functional Partners:
Nmar_0259
KEGG- chy-CHY_1372 hypothetical protein (143 aa)
   
  0.999
Nmar_0258
KEGG- chy-CHY_1373 succinate dehydrogenase; TIGRFAM- succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM- fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase (570 aa)
   
  0.997
Nmar_0261
KEGG- hbu-Hbut_0157 succinate dehydrogenase/fumarate reductase iron-sulfur protein; TIGRFAM- succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM- ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein (249 aa)
   
  0.996
sucD
Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit (305 aa)
   
 
  0.950
Nmar_1123
Succinate--CoA ligase (ADP-forming); PFAM- ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; KEGG- iho-Igni_0086 succinyl-CoA synthetase (ADP-forming) beta subunit (368 aa)
   
 
  0.947
Nmar_0865
PFAM- aminotransferase class I and II; KEGG- mhu-Mhun_1459 aminotransferase, class I and II (452 aa)
         
    0.800
Nmar_0546
Aminotransferase; PFAM- Chorismate mutase; aminotransferase class I and II; KEGG- tpt-Tpet_1516 aminotransferase, class I and II (456 aa)
         
    0.800
argH
KEGG- mtp-Mthe_0492 argininosuccinate lyase; TIGRFAM- argininosuccinate lyase; PFAM- fumarate lyase (485 aa)
         
    0.800
Nmar_0257
PFAM- transcriptional regulator PadR family protein; KEGG- tac-Ta0868m predicted transcription regulator (169 aa)
              0.600
Nmar_0183
PFAM- cytochrome c oxidase subunit II; KEGG- noc-Noc_1244 cytochrome c oxidase, subunit II (143 aa)
     
   
  0.489
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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