STRINGSTRING
Nmar_0262 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0262" - PFAM: protein of unknown function DUF59 in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0262PFAM- protein of unknown function DUF59; KEGG- lbl-LBL_0671 hypothetical protein (118 aa)    
Predicted Functional Partners:
argH
KEGG- mtp-Mthe_0492 argininosuccinate lyase; TIGRFAM- argininosuccinate lyase; PFAM- fumarate lyase (485 aa)
              0.630
Nmar_1556
PFAM- Haloacid dehalogenase domain protein hydrolase; KEGG- nph-NP0770A hypothetical protein (306 aa)
 
        0.472
Nmar_0677
KEGG- hma-rrnAC1780 hypothetical protein (256 aa)
   
          0.468
Nmar_0934
KEGG- sso-SSO0931 hypothetical protein (138 aa)
   
          0.462
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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