STRINGSTRING
Nmar_0287 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0287" - PFAM: Polyprenyl synthetase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0287PFAM- Polyprenyl synthetase; KEGG- tko-TK1468 bifunctional short-chain isoprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family (283 aa)    
Predicted Functional Partners:
Nmar_0312
PFAM- Polyprenyl synthetase; KEGG- mka-MK0774 geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family (326 aa)
   
   
 
0.914
Nmar_0938
PFAM- UbiA prenyltransferase; KEGG- sfu-Sfum_0412 UbiA prenyltransferase (296 aa)
 
   
  0.858
uppS
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific); Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids (263 aa)
 
 
  0.772
tatC
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes (263 aa)
 
     
  0.722
Nmar_0546
Aminotransferase; PFAM- Chorismate mutase; aminotransferase class I and II; KEGG- tpt-Tpet_1516 aminotransferase, class I and II (456 aa)
 
   
  0.721
Nmar_1267
PFAM- dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; KEGG- rrs-RoseRS_0064 methionine synthase (832 aa)
   
   
  0.594
Nmar_0288
PFAM- TENA/THI-4 domain protein; KEGG- nmu-Nmul_A2636 coenzyme PQQ synthesis C (246 aa)
              0.592
mtnP
S-methyl-5’-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5’- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily (263 aa)
         
  0.537
Nmar_1447
PFAM- phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG- rci-RCIX2409 phosphoglucomutase/phosphomannomutase (432 aa)
 
   
  0.510
Nmar_0258
KEGG- chy-CHY_1373 succinate dehydrogenase; TIGRFAM- succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM- fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase (570 aa)
   
 
  0.505
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (12%) [HD]