STRINGSTRING
Nmar_0294 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0294" - PFAM: protein of unknown function Met10 in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0294PFAM- protein of unknown function Met10; KEGG- smr-Smar_1376 protein of unknown function Met10 (275 aa)    
Predicted Functional Partners:
Nmar_0295
ABC transporter related; PFAM- 4Fe-4S ferredoxin iron-sulfur binding domain protein; ABC transporter related; metal-binding domain in RNase L inhibitor, RLI; SMART- AAA ATPase; KEGG- pab-PAB0824 RNase l inhibitor (595 aa)
 
        0.961
Nmar_1297
KEGG- mmq-MmarC5_1019 diphthine synthase; TIGRFAM- diphthine synthase; PFAM- Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (345 aa)
 
        0.832
Nmar_1394
PFAM- N2N2-dimethylguanosine tRNA methyltransferase; KEGG- msi-Msm_1031 N2,N2-dimethylguanosine tRNA methyltransferase, Trm1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family (382 aa)
   
   
  0.774
Nmar_1606
tRNA (cytidine(56)-2’-O)-methyltransferase; Specifically catalyzes the AdoMet-dependent 2’-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family (177 aa)
   
     
  0.744
Nmar_0690
PFAM- tRNA methyltransferase complex GCD14 subunit; KEGG- smr-Smar_0877 methyltransferase type 11 (293 aa)
 
 
  0.709
prf1
Peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (426 aa)
   
 
  0.696
taw1
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe) (341 aa)
   
   
  0.680
Nmar_1531
Mn2+-dependent serine/threonine protein kinase; PFAM- protein of unknown function RIO1; KEGG- mja-MJ1130 O-sialoglycoprotein endopeptidase (206 aa)
   
   
  0.648
Nmar_1412
PFAM- Translation initiation factor IF2/IF5; KEGG- pab-PAB0959 translation initiation factor aIF-2 beta subunit (140 aa)
   
        0.628
Nmar_0428
PFAM- RNA polymerase dimerisation; RNA polymerase insert; SMART- RNA polymerase RpoA/D/Rpb3-type; KEGG- mst-Msp_0868 RpoD (221 aa)
   
        0.617
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (12%) [HD]