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Nmar_0295 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0295" - ABC transporter related in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nmar_0295ABC transporter related; PFAM- 4Fe-4S ferredoxin iron-sulfur binding domain protein; ABC transporter related; metal-binding domain in RNase L inhibitor, RLI; SMART- AAA ATPase; KEGG- pab-PAB0824 RNase l inhibitor (595 aa)    
Predicted Functional Partners:
prf1
Peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (426 aa)
   
 
  0.997
rpl10
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (288 aa)
   
 
  0.969
rps15
PFAM- ribosomal protein S15; Ribosomal S13S15 domain protein; KEGG- pis-Pisl_0780 ribosomal S13S15-like protein (149 aa)
   
 
  0.968
Nmar_1254
PFAM- Ribosomal protein L15e; KEGG- smr-Smar_0852 ribosomal protein L15e (154 aa)
 
      0.965
rps17
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (107 aa)
   
      0.965
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (151 aa)
   
      0.963
rpl24
50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (168 aa)
   
      0.961
Nmar_0294
PFAM- protein of unknown function Met10; KEGG- smr-Smar_1376 protein of unknown function Met10 (275 aa)
 
        0.961
rps17e
KEGG- msi-Msm_0833 ribosomal protein S17a; Belongs to the eukaryotic ribosomal protein eS17 family (129 aa)
   
      0.959
rpl22
50S ribosomal protein L22; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (152 aa)
   
      0.957
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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