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Nmar_0306 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0306" - KEGG: mse:Msed_1909 hypothetical protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0306KEGG- mse-Msed_1909 hypothetical protein (253 aa)    
Predicted Functional Partners:
Nmar_0307
PFAM- Protein of unknown function UPF0147; KEGG- hbu-Hbut_1631 hypothetical protein; Belongs to the UPF0147 family (89 aa)
 
          0.853
Nmar_0305
annotation not available (115 aa)
              0.839
Nmar_0308
PFAM- Rieske [2Fe-2S] domain protein; KEGG- rca-Rcas_2708 Rieske (2Fe-2S) domain protein (102 aa)
              0.669
Nmar_0244
PFAM- glycosyl transferase family 4; KEGG- tpe-Tpen_0412 glycosyl transferase, family 4 (330 aa)
 
     
  0.624
Nmar_0304
annotation not available (129 aa)
              0.567
Nmar_1762
PFAM- regulatory protein AsnC/Lrp family; KEGG- sai-Saci_0731 hypothetical protein (85 aa)
   
          0.556
Nmar_0246
UPF0434 protein Nmar_0246; PFAM- protein of unknown function DUF343; KEGG- tpe-Tpen_0815 protein of unknown function DUF343; Belongs to the UPF0434 family (89 aa)
 
 
      0.555
Nmar_0710
PFAM- regulatory protein AsnC/Lrp family; KEGG- sso-SSO5522 regulatory protein, AsnC family, putative (77 aa)
   
          0.535
Nmar_0599
PFAM- Protein of unknown function DUF1512; KEGG- tpe-Tpen_0702 hypothetical protein (373 aa)
   
          0.519
csl4
Exosome complex component Csl4; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs (183 aa)
   
        0.518
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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