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Nmar_0307 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0307" - PFAM: Protein of unknown function UPF0147 in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0307PFAM- Protein of unknown function UPF0147; KEGG- hbu-Hbut_1631 hypothetical protein; Belongs to the UPF0147 family (89 aa)    
Predicted Functional Partners:
Nmar_0306
KEGG- mse-Msed_1909 hypothetical protein (253 aa)
 
          0.853
Nmar_0308
PFAM- Rieske [2Fe-2S] domain protein; KEGG- rca-Rcas_2708 Rieske (2Fe-2S) domain protein (102 aa)
              0.733
Nmar_0305
annotation not available (115 aa)
              0.656
rpl30
PFAM- ribosomal protein L30; KEGG- smr-Smar_1040 ribosomal protein L30P (155 aa)
   
          0.590
albA
DNA/RNA-binding protein Alba; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family (95 aa)
   
          0.579
Nmar_0309
PFAM- GCN5-related N-acetyltransferase; KEGG- nph-NP2494A protein N-acetyltransferase homolog (258 aa)
              0.540
Nmar_0621
PFAM- Sjogrens syndrome scleroderma autoantigen 1; KEGG- afu-AF2370 hypothetical protein (109 aa)
              0.539
Nmar_0349
PFAM- Like-Sm ribonucleoprotein core; SMART- Sm-family ribonucleoprotein; KEGG- iho-Igni_0978 like-Sm ribonucleoprotein, core (80 aa)
   
          0.528
Nmar_0304
annotation not available (129 aa)
              0.521
rpl21e
PFAM- Ribosomal protein L21e; KEGG- hbu-Hbut_1660 50S ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family (99 aa)
   
          0.519
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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