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rpoN protein (Nitrosopumilus maritimus) - STRING interaction network
"rpoN" - DNA-directed RNA polymerase subunit N in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
Databases
Textmining
[Homology]
Score
rpoNDNA-directed RNA polymerase subunit N; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (90 aa)    
Predicted Functional Partners:
rpoK
DNA-directed RNA polymerase subunit K; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (182 aa)
 
 
  0.999
rpoA2
DNA-directed RNA polymerase subunit A’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1263 aa)
 
 
  0.999
rpoH
DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (83 aa)
 
 
  0.999
Nmar_0428
PFAM- RNA polymerase dimerisation; RNA polymerase insert; SMART- RNA polymerase RpoA/D/Rpb3-type; KEGG- mst-Msp_0868 RpoD (221 aa)
 
 
  0.999
Nmar_1032
SMART- RNA polymerase Rbp10; KEGG- tpe-Tpen_0510 RNA polymerase Rbp10 (67 aa)
     
 
  0.999
Nmar_1757
annotation not available (92 aa)
     
 
  0.999
Nmar_0347
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1115 aa)
 
 
  0.999
Nmar_1235
TIGRFAM- DNA-directed RNA polymerase; PFAM- RNA binding S1 domain protein; RNA polymerase Rpb7 domain protein; KEGG- mja-MJ0397 DNA-directed RNA polymerase subunit E’ (198 aa)
     
 
  0.999
Nmar_1383
PFAM- RNA polymerase Rpb4; KEGG- tpe-Tpen_0352 RNA polymerase Rpb4 (108 aa)
       
 
  0.999
Nmar_1756
PFAM- Transcription factor TFIIS; SMART- DNA-directed RNA polymerase, M15 kDa subunit; KEGG- mja-MJ1148 DNA-directed RNA polymerase subunit M; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family (105 aa)
   
 
  0.980
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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