STRINGSTRING
Nmar_0329 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0329" - PFAM: ABC transporter related in Nitrosopumilus maritimus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0329PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- rrs-RoseRS_3069 ABC transporter related (256 aa)    
Predicted Functional Partners:
Nmar_0330
PFAM- ABC-3 protein; KEGG- rrs-RoseRS_3068 ABC-3 protein (314 aa)
  0.991
Nmar_0331
PFAM- ABC-3 protein; KEGG- rca-Rcas_1721 transcriptional regulator, MarR family (368 aa)
  0.991
Nmar_0328
PFAM- periplasmic solute binding protein; KEGG- rca-Rcas_1724 periplasmic solute binding protein (323 aa)
 
  0.990
Nmar_1245
PFAM- SMC domain protein; KEGG- sto-ST2108 hypothetical purine NTPase (693 aa)
         
  0.600
Nmar_0327
annotation not available (167 aa)
              0.576
Nmar_1653
PFAM- ABC-3 protein; KEGG- tdn-Tmden_2063 ABC-3 (272 aa)
 
 
  0.538
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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