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Nmar_0350 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0350" - annotation not available in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0350annotation not available (392 aa)    
Predicted Functional Partners:
Nmar_0349
PFAM- Like-Sm ribonucleoprotein core; SMART- Sm-family ribonucleoprotein; KEGG- iho-Igni_0978 like-Sm ribonucleoprotein, core (80 aa)
              0.720
rpoA2
DNA-directed RNA polymerase subunit A’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1263 aa)
              0.720
Nmar_0347
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1115 aa)
              0.720
rpoH
DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (83 aa)
              0.720
Nmar_0351
PFAM- TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART- Tetratricopeptide domain protein; KEGG- mmz-MmarC7_1279 periplasmic copper-binding (553 aa)
              0.663
Nmar_0352
PFAM- ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG- sai-Saci_0690 50S ribosomal protein L30E (107 aa)
              0.494
Nmar_0345
annotation not available (279 aa)
              0.473
rps7
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (199 aa)
              0.407
rps12
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (145 aa)
              0.407
nusA
Probable transcription termination protein NusA; Participates in transcription termination (154 aa)
              0.407
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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