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nusA protein (Nitrosopumilus maritimus) - STRING interaction network
"nusA" - Probable transcription termination protein NusA in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nusAProbable transcription termination protein NusA; Participates in transcription termination (154 aa)    
Predicted Functional Partners:
rpoA2
DNA-directed RNA polymerase subunit A’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1263 aa)
   
 
  0.982
rps7
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (199 aa)
   
      0.939
rps12
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (145 aa)
   
        0.930
Nmar_0347
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1115 aa)
   
 
  0.909
Nmar_0428
PFAM- RNA polymerase dimerisation; RNA polymerase insert; SMART- RNA polymerase RpoA/D/Rpb3-type; KEGG- mst-Msp_0868 RpoD (221 aa)
 
 
  0.850
Nmar_0352
PFAM- ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG- sai-Saci_0690 50S ribosomal protein L30E (107 aa)
              0.840
infB
Probable translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 (593 aa)
 
 
  0.814
spt5
Transcription elongation factor Spt5; Stimulates transcription elongation (152 aa)
 
 
  0.800
rpl18e
KEGG- mae-Maeo_1097 ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL18 family (115 aa)
 
          0.790
rps10
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (102 aa)
   
 
  0.752
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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