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Nmar_0471 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0471" - KEGG: cth:Cthe_2109 copper amine oxidase-like protein in Nitrosopumilus maritimus
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nmar_0471KEGG- cth-Cthe_2109 copper amine oxidase-like protein (741 aa)    
Predicted Functional Partners:
Nmar_1632
PFAM- DNA topoisomerase type IA zn finger domain protein; KEGG- tvo-TVN0019 DNA topoisomerase I (152 aa)
   
 
  0.591
Nmar_0472
Transcriptional regulator, ArsR family; PFAM- regulatory protein ArsR; KEGG- rci-RCIX1274 putative transcription regulator (ArsR family) (239 aa)
              0.592
fen
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. Binds the unpaired 3’-DNA end and kinks the DNA to facilitate 5’ cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] (340 aa)
     
 
  0.498
Nmar_0944
PFAM- helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART- DEAD-like helicases; KEGG- tko-TK1021 helicase-associated endonuclease for fork-structured DNA (502 aa)
     
 
  0.494
pcn
DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication (248 aa)
   
 
  0.483
Nmar_0948
PFAM- DNA polymerase B exonuclease; DNA polymerase B region; SMART- DNA-directed DNA polymerase B; KEGG- tpe-Tpen_0298 DNA polymerase B region (852 aa)
   
 
  0.481
top6A
Type 2 DNA topoisomerase 6 subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family (370 aa)
     
 
  0.472
Nmar_0505
KEGG- tvo-TVN1236 hypothetical protein (104 aa)
     
 
  0.461
Nmar_0089
PFAM- nucleic acid binding OB-fold tRNA/helicase-type; KEGG- mmp-MMP1032 replication protein A (466 aa)
     
 
  0.461
Nmar_1700
PFAM- H+transporting two-sector ATPase C (AC39) subunit; KEGG- mja-MJ0219 ATP synthase, subunit C (344 aa)
   
 
      0.423
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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