STRINGSTRING
Nmar_0476 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0476" - PFAM: ABC-2 type transporter in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0476PFAM- ABC-2 type transporter; KEGG- mth-MTH1092 ABC-2 type transport system permease protein (261 aa)    
Predicted Functional Partners:
Nmar_0475
KEGG- sto-ST1772 hypothetical ABC transporter ATP-binding protein; TIGRFAM- daunorubicin resistance ABC transporter ATPase subunit; PFAM- ABC transporter related; SMART- AAA ATPase (333 aa)
 
  0.964
Nmar_0090
PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- tvo-TVN1367 ABC transport system ATP-binding protein (312 aa)
 
  0.660
Nmar_0477
PFAM- NHL repeat containing protein; Hemolysin-type calcium-binding region; KEGG- mac-MA2021 hypothetical protein (525 aa)
              0.625
Nmar_0474
annotation not available (150 aa)
              0.456
Nmar_0478
annotation not available (543 aa)
              0.439
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (12%) [HD]