STRINGSTRING
Nmar_0492 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0492" - TIGRFAM: uroporphyrin-III C-methyltransferase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0492TIGRFAM- uroporphyrin-III C-methyltransferase; PFAM- Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG- neu-NE0532 uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family (246 aa)    
Predicted Functional Partners:
Nmar_0493
PFAM- Uroporphyrinogen III synthase HEM4; KEGG- sat-SYN_02272 uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase (267 aa)
 
  0.999
Nmar_0511
TIGRFAM- siroheme synthase; KEGG- aae-aq_1237 precorrin-2 oxidase / ferrochelatase (217 aa)
 
  0.998
hemC
Probable porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (311 aa)
   
  0.997
Nmar_0058
TIGRFAM- precorrin-2 C20-methyltransferase; PFAM- Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG- gsu-GSU2995 precorrin-2 C20-methyltransferase (240 aa)
   
  0.969
hemL
TIGRFAM- glutamate-1-semialdehyde-2,1-aminomutase; PFAM- aminotransferase class-III; KEGG- mja-MJ0603 glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily (424 aa)
   
 
  0.919
Nmar_0679
PFAM- nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG- tth-TTC0313 ferredoxin-nitrite reductase (602 aa)
 
   
  0.915
Nmar_0509
PFAM- delta-aminolevulinic acid dehydratase; KEGG- bld-BLi02943 delta-aminolevulinic acid dehydratase; RBL00019; Belongs to the ALAD family (326 aa)
 
 
  0.828
Nmar_1245
PFAM- SMC domain protein; KEGG- sto-ST2108 hypothetical purine NTPase (693 aa)
   
   
  0.809
Nmar_0488
PFAM- low molecular weight phosphotyrosine protein phosphatase; KEGG- cef-CE0877 putative arsenate reductase (132 aa)
   
   
  0.764
Nmar_0489
PFAM- major intrinsic protein; KEGG- bca-BCE_A0165 MIP family channel protein (227 aa)
              0.763
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (11%) [HD]