STRINGSTRING
Nmar_0499 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0499" - annotation not available in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0499annotation not available (114 aa)    
Predicted Functional Partners:
Nmar_0498
TIGRFAM- SUF system FeS assembly protein, NifU family; PFAM- nitrogen-fixing NifU domain protein; KEGG- rrs-RoseRS_0711 SUF system FeS assembly protein, NifU family (147 aa)
              0.917
Nmar_0497
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (414 aa)
              0.917
Nmar_0496
TIGRFAM- FeS assembly protein SufD; PFAM- SufBD protein; KEGG- sae-NWMN_0789 FeS assembly protein SufB (466 aa)
              0.905
Nmar_0495
TIGRFAM- FeS assembly protein SufB; PFAM- SufBD protein; KEGG- rxy-Rxyl_0170 FeS assembly protein SufB (466 aa)
              0.782
Nmar_0494
KEGG- rno-686187 hypothetical protein LOC686187 (62 aa)
              0.541
Nmar_0493
PFAM- Uroporphyrinogen III synthase HEM4; KEGG- sat-SYN_02272 uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase (267 aa)
              0.462
Nmar_0492
TIGRFAM- uroporphyrin-III C-methyltransferase; PFAM- Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG- neu-NE0532 uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family (246 aa)
              0.462
hemC
Probable porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps (311 aa)
              0.462
hemL
TIGRFAM- glutamate-1-semialdehyde-2,1-aminomutase; PFAM- aminotransferase class-III; KEGG- mja-MJ0603 glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily (424 aa)
              0.462
Nmar_0489
PFAM- major intrinsic protein; KEGG- bca-BCE_A0165 MIP family channel protein (227 aa)
              0.422
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (17%) [HD]