STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0511TIGRFAM: siroheme synthase; KEGG: aae:aq_1237 precorrin-2 oxidase / ferrochelatase. (217 aa)    
Predicted Functional Partners:
Nmar_0492
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: neu:NE0532 uroporphyrinogen-III methylase; Belongs to the precorrin methyltransferase family.
 
 
 0.990
Nmar_0081
PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: ter:Tery_4741 cobalamin (vitamin B12) biosynthesis CbiX protein.
  
 
 0.980
hemA-2
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
     
 0.950
Nmar_0058
TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gsu:GSU2995 precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
    
 0.944
Nmar_0679
PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: tth:TTC0313 ferredoxin-nitrite reductase.
 
  
 0.779
Nmar_0509
Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: bld:BLi02943 delta-aminolevulinic acid dehydratase; RBL00019; Belongs to the ALAD family.
     
 0.764
Nmar_0512
SMART: regulatory protein AsnC/Lrp family; KEGG: nis:NIS_1776 transcriptional regulator, AsnC/Lrp family.
 
   
 0.750
Nmar_0049
KEGG: sso:SSO2911 phosphoadenosine phosphosulfate reductase; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase.
  
  
 0.740
Nmar_0023
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.730
Nmar_0493
PFAM: Uroporphyrinogen III synthase HEM4; KEGG: sat:SYN_02272 uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase.
 
  
 0.710
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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