STRINGSTRING
Nmar_0521 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0521" - PFAM: chromosome segregation and condensation protein ScpB in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0521PFAM- chromosome segregation and condensation protein ScpB; KEGG- pab-PAB2162 putative segregation and condensation protein B (192 aa)    
Predicted Functional Partners:
Nmar_0522
PFAM- chromosome segregation and condensation protein ScpA; KEGG- pab-PAB2110 putative segregation and condensation protein A (225 aa)
   
 
  0.969
rps8e
KEGG- tpe-Tpen_0358 ribosomal protein S8e (127 aa)
              0.641
Nmar_0519
KEGG- iho-Igni_0768 signal recognition particle, subunit SRP19 (SRP19) (99 aa)
              0.641
Nmar_0651
PFAM- SMC domain protein; SMCs flexible hinge domain protein; KEGG- pfu-PF1843 chromosome segregation protein smc (1174 aa)
 
 
 
  0.602
Nmar_1262
PFAM- Tubulin/FtsZ GTPase; KEGG- mka-MK0821 ftsZ GTPase involved in cell division (316 aa)
 
     
  0.528
Nmar_0984
TIGRFAM- biotin--acetyl-CoA-carboxylase ligase; PFAM- biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; KEGG- cth-Cthe_2585 biotin--acetyl-CoA-carboxylase ligase (335 aa)
   
     
  0.519
Nmar_0546
Aminotransferase; PFAM- Chorismate mutase; aminotransferase class I and II; KEGG- tpt-Tpet_1516 aminotransferase, class I and II (456 aa)
              0.508
Nmar_1245
PFAM- SMC domain protein; KEGG- sto-ST2108 hypothetical purine NTPase (693 aa)
         
  0.493
purD
KEGG- cbd-COXBU7E912_1753 phosphoribosylamine--glycine ligase; TIGRFAM- phosphoribosylamine--glycine ligase; PFAM- phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; ATP-grasp domain protein; Belongs to the GARS family (421 aa)
              0.491
Nmar_0523
PFAM- Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG- bja-blr2780 probable NAD-dependent alcohol dehydrogenase (350 aa)
              0.490
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (20%) [HD]