STRINGSTRING
Nmar_0541 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0541" - PFAM: Nucleotidyl transferase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0541PFAM- Nucleotidyl transferase; KEGG- cth-Cthe_1079 nucleotidyl transferase (238 aa)    
Predicted Functional Partners:
Nmar_0224
PFAM- phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG- pto-PTO1166 phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family (449 aa)
 
 
  0.974
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (327 aa)
       
  0.915
Nmar_0540
PFAM- GCN5-related N-acetyltransferase; KEGG- afm-AFUA_6G02460 glucosamine 6-phosphate acetyltransferase, putative (145 aa)
         
  0.847
Nmar_0424
PFAM- Nucleotidyl transferase; KEGG- pho-PH1022 putative mannose-1-phosphate guanylyltransferase (239 aa)
   
   
 
0.839
Nmar_0542
KEGG- pab-PAB1646 hydroxymethylpyrimidine phosphate kinase; TIGRFAM- phosphomethylpyrimidine kinase; PFAM- Phosphomethylpyrimidine kinase type-1 (432 aa)
   
        0.706
mpnS
Methylphosphonate synthase; Catalyzes the conversion of 2-hydroxyethylphosphonate into methylphosphonate in the methylphosphonate biosynthesis pathway (457 aa)
           
  0.600
Nmar_0299
PFAM- ribulose-phosphate 3-epimerase; Transketolase domain protein; KEGG- pth-PTH_2750 transketolase, N-terminal subunit (555 aa)
   
        0.575
Nmar_0544
PFAM- NUDIX hydrolase; KEGG- det-DET1290 NUDIX domain protein (134 aa)
     
 
  0.496
Nmar_0145
annotation not available (151 aa)
   
 
  0.479
Nmar_1412
PFAM- Translation initiation factor IF2/IF5; KEGG- pab-PAB0959 translation initiation factor aIF-2 beta subunit (140 aa)
     
 
  0.428
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (14%) [HD]