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lysS protein (Nitrosopumilus maritimus) - STRING interaction network
"lysS" - Lysine--tRNA ligase in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
lysSLysine--tRNA ligase; KEGG- sth-STH208 lysyl-tRNA synthetase; TIGRFAM- lysyl-tRNA synthetase; PFAM- Lysyl-tRNA synthetase class 1c; Belongs to the class-I aminoacyl-tRNA synthetase family (529 aa)    
Predicted Functional Partners:
Nmar_0579
Histone acetyltransferase, ELP3 family; KEGG- mka-MK1052 ELP3 component of the RNA polymerase II complex, consists of an N-terminal BioB/LipA-like domain and a C-terminal histone acetylase domain; TIGRFAM- histone acetyltransferase, ELP3 family; PFAM- GCN5-related N-acetyltransferase; Radical SAM domain protein; SMART- Elongator protein 3/MiaB/NifB (527 aa)
              0.917
Nmar_0580
KEGG- cab-CAB398 histone-like protein (102 aa)
              0.665
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (227 aa)
 
          0.600
Nmar_0581
PFAM- sodium/hydrogen exchanger; KEGG- rci-RRC455 putative Na(+)/H(+) antiporter (416 aa)
              0.552
Nmar_0577
Uncharacterized protein; KEGG- ehi-82.t00025 viral A-type inclusion protein repeat, putative Pfam- Nha1_C DUF148 ERM Prefoldin_2 WXG100 Vicilin_N TBPIP Myosin_tail_1 Filament YscO Bacillus_HBL EzrA DUF948 Rab5-bind Laminin_I MpPF2 Vps51 MSG Spectrin LMP PROSITE- GLU_RICH LYS_RICH (250 aa)
              0.467
purM
KEGG- msi-Msm_1039 phosphoribosylformylglycinamidine cyclo-ligase (AirS), PurM; TIGRFAM- phosphoribosylformylglycinamidine cyclo-ligase; PFAM- AIR synthase related protein; AIR synthase related protein domain protein (340 aa)
              0.450
rlmE
Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit (197 aa)
   
          0.415
Nmar_0107
PFAM- peptidase M50; SMART- PDZ/DHR/GLGF domain protein; KEGG- pfu-PF0167 metalloprotease (398 aa)
              0.407
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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