STRINGSTRING
Nmar_0596 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0596" - PFAM: cyclase/dehydrase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0596PFAM- cyclase/dehydrase; KEGG- pto-PTO1272 hypothetical protein (138 aa)    
Predicted Functional Partners:
Nmar_0595
PFAM- glycosyl transferase family 2; KEGG- cte-CT1987 glycosyl transferase (402 aa)
              0.845
Nmar_0594
KEGG- rca-Rcas_1750 2-alkenal reductase; PFAM- peptidase S1 and S6 chymotrypsin/Hap; SMART- PDZ/DHR/GLGF domain protein (379 aa)
              0.728
Nmar_0593
PFAM- Radical SAM domain protein; SMART- Elongator protein 3/MiaB/NifB; KEGG- mka-MK0898 predicted enzyme related to thiamine biosynthesis enzyme ThiH (390 aa)
              0.620
Nmar_0592
PFAM- Radical SAM domain protein; SMART- Elongator protein 3/MiaB/NifB; KEGG- cme-CMK049C similar to biotin synthase Pfam- Radical_SAM (419 aa)
              0.620
Nmar_0591
PFAM- peptidase U62 modulator of DNA gyrase; KEGG- mma-MM_0126 PmbA protein (452 aa)
              0.617
Nmar_0997
PFAM- Methyltransferase type 11; KEGG- cte-CT0383 methlytransferase, putative (282 aa)
              0.430
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (10%) [HD]