STRINGSTRING
Nmar_0613 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0613" - PFAM: integrase family protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0613PFAM- integrase family protein; KEGG- sto-ST1393 hypothetical integrase/recombinase (313 aa)    
Predicted Functional Partners:
Nmar_0610
PFAM- restriction modification system DNA specificity domain; putative RNA methylase; N-6 DNA methylase; Methyltransferase type 11; KEGG- fta-FTA_1029 hypothetical protein (730 aa)
   
   
  0.586
Nmar_1398
KEGG- syn-slr1056 hypothetical protein (697 aa)
 
          0.575
Nmar_0092
KEGG- tpe-Tpen_1215 UDP-glucose/GDP-mannose dehydrogenase (246 aa)
   
        0.557
Nmar_0962
KEGG- hma-pNG7298 hypothetical protein (250 aa)
   
          0.551
Nmar_0616
KEGG- mtp-Mthe_0393 hypothetical protein (1096 aa)
 
          0.548
Nmar_0506
PFAM- SNARE associated Golgi protein; KEGG- bte-BTH_II1310 hypothetical protein (206 aa)
   
          0.541
Nmar_1767
PFAM- heat shock protein DnaJ domain protein; KEGG- cfa-611441 similar to DnaJ homolog subfamily A member 1 (Heat shock 40 kDa protein 4) (DnaJ protein homolog 2) (HSJ-2) (HSDJ) (384 aa)
 
          0.532
Nmar_0445
Uncharacterized protein; KEGG- tva-TVAG_193760 DNA-directed RNA polymerase, omega subunit family protein Pfam- DUF683 TBPIP bZIP_1 Tektin HalX PspA_IM30 Tup_N GBP_C Vicilin_N priB_priC DMPK_coil PLU-1 DUF812 Cortex-I_coil HALZ LMP UVR ATG16 Prefoldin_2 Syntaxin-6_N Myosin_tail_1 Spectrin Tropomyosin DUF904 SpoOE-like Rab5-bind Filament DUF593 HSBP1 TPR_MLP1_2 Nnf1 PROSITE- GLU_RICH LYS_RICH (509 aa)
   
   
  0.523
Nmar_1199
KEGG- cbe-Cbei_3614 hypothetical protein (533 aa)
   
          0.523
Nmar_1444
KEGG- nmu-Nmul_A2605 hypothetical protein (583 aa)
   
          0.518
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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