STRINGSTRING
Nmar_0614 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0614" - KEGG: sbl:Sbal_2622 hypothetical protein in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0614KEGG- sbl-Sbal_2622 hypothetical protein (203 aa)    
Predicted Functional Partners:
Nmar_0615
KEGG- dar-Daro_3642 hypothetical protein (194 aa)
              0.845
Nmar_0613
PFAM- integrase family protein; KEGG- sto-ST1393 hypothetical integrase/recombinase (313 aa)
              0.511
Nmar_0616
KEGG- mtp-Mthe_0393 hypothetical protein (1096 aa)
              0.481
Nmar_0617
Probable ribosome biogenesis protein Nmar_0617; Probable pre-rRNA processing protein involved in ribosome biogenesis (163 aa)
              0.423
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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