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Nmar_0616 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0616" - KEGG: mtp:Mthe_0393 hypothetical protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0616KEGG- mtp-Mthe_0393 hypothetical protein (1096 aa)    
Predicted Functional Partners:
Nmar_0617
Probable ribosome biogenesis protein Nmar_0617; Probable pre-rRNA processing protein involved in ribosome biogenesis (163 aa)
              0.727
Nmar_0503
KEGG- rha-RHA1_ro00689 hypothetical protein (317 aa)
   
          0.621
Nmar_0754
Uncharacterized protein; KEGG- tva-TVAG_005450 conserved hypothetical protein Pfam- DASH_Dad4 TolA PROSITE- ASP_RICH GLU_RICH LYS_RICH (493 aa)
   
          0.619
Nmar_0702
TIGRFAM- PAS sensor protein; PFAM- PAS fold-3 domain protein; PAS fold domain protein; KEGG- sat-SYN_02593 transcriptional regulator GerE family (174 aa)
   
          0.618
Nmar_1366
Methyltransferase type 11; PFAM- protein of unknown function DUF343; Methyltransferase type 11 (288 aa)
   
          0.611
Nmar_0231
PFAM- Ig family protein; KEGG- rci-RRC213 hypothetical protein (556 aa)
   
          0.605
Nmar_0445
Uncharacterized protein; KEGG- tva-TVAG_193760 DNA-directed RNA polymerase, omega subunit family protein Pfam- DUF683 TBPIP bZIP_1 Tektin HalX PspA_IM30 Tup_N GBP_C Vicilin_N priB_priC DMPK_coil PLU-1 DUF812 Cortex-I_coil HALZ LMP UVR ATG16 Prefoldin_2 Syntaxin-6_N Myosin_tail_1 Spectrin Tropomyosin DUF904 SpoOE-like Rab5-bind Filament DUF593 HSBP1 TPR_MLP1_2 Nnf1 PROSITE- GLU_RICH LYS_RICH (509 aa)
   
          0.603
Nmar_1257
KEGG- cal-CaO19.8264 hypothetical protein (297 aa)
   
          0.571
Nmar_1528
KEGG- saz-Sama_1102 AAA ATPase containing von Willebrand factor type A (vWA) domain (792 aa)
   
          0.566
Nmar_0713
KEGG- azo-azo2022 conserved hypothetical secreted protein (153 aa)
   
          0.564
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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