STRINGSTRING
Nmar_0618 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0618" - KEGG: iho:Igni_1201 solute binding protein-like protein in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0618KEGG- iho-Igni_1201 solute binding protein-like protein (820 aa)    
Predicted Functional Partners:
Nmar_0718
PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- pab-PAB1195 oligopeptide transport system permease protein (455 aa)
 
   
    0.941
Nmar_0719
PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- iho-Igni_1336 binding-protein-dependent transport systems inner membrane component (349 aa)
 
   
  0.939
Nmar_0652
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG- tma-TM1151 putative oligopeptide transport system ATP-binding protein; TIGRFAM- oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM- ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART- AAA ATPase (322 aa)
 
   
    0.924
Nmar_1064
KEGG- smr-Smar_1329 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM- oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM- ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART- AAA ATPase (311 aa)
 
   
  0.922
Nmar_0619
KEGG- smr-Smar_1364 hypothetical protein (217 aa)
              0.606
Nmar_1058
PFAM- SNARE associated Golgi protein; KEGG- tpe-Tpen_0332 hypothetical protein (210 aa)
   
          0.586
Nmar_1428
PFAM- THUMP domain protein; KEGG- tpe-Tpen_0214 THUMP domain protein (173 aa)
   
          0.541
Nmar_1197
PFAM- regulatory protein AsnC/Lrp family; KEGG- hbu-Hbut_0009 transcriptional regulator of AsnC family - conserved archaeal protein (76 aa)
   
          0.525
Nmar_0599
PFAM- Protein of unknown function DUF1512; KEGG- tpe-Tpen_0702 hypothetical protein (373 aa)
   
          0.521
Nmar_1545
PFAM- peptidase S8 and S53 subtilisin kexin sedolisin; KEGG- pai-PAE0712 surface layer-associated stable protease, conjectural; Belongs to the peptidase S8 family (1269 aa)
   
          0.520
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (12%) [HD]