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Nmar_0626 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0626" - TIGRFAM: LPPG domain containing protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0626TIGRFAM- LPPG domain containing protein; PFAM- protein of unknown function UPF0052 and CofD; KEGG- rrs-RoseRS_1138 LPPG domain containing protein (319 aa)    
Predicted Functional Partners:
Nmar_0625
PFAM- protein of unknown function DUF121; KEGG- mth-MTH613 hypothetical protein (212 aa)
 
   
  0.998
Nmar_0667
TIGRFAM- F420-dependent oxidoreductase, putative; PFAM- protein of unknown function DUF129; KEGG- rrs-RoseRS_1136 F420-dependent oxidoreductase, putative (241 aa)
 
 
  0.984
Nmar_0593
PFAM- Radical SAM domain protein; SMART- Elongator protein 3/MiaB/NifB; KEGG- mka-MK0898 predicted enzyme related to thiamine biosynthesis enzyme ThiH (390 aa)
 
   
  0.964
Nmar_0592
PFAM- Radical SAM domain protein; SMART- Elongator protein 3/MiaB/NifB; KEGG- cme-CMK049C similar to biotin synthase Pfam- Radical_SAM (419 aa)
 
   
  0.954
Nmar_0419
KEGG- mhu-Mhun_0020 uncharacterised conserved protein UCP005026 (259 aa)
 
   
  0.851
Nmar_0180
PFAM- NADP oxidoreductase coenzyme F420-dependent; KEGG- mbu-Mbur_1974 NADPH-dependent F420 reductase (223 aa)
 
          0.647
Nmar_0842
PFAM- luciferase family protein; KEGG- hma-rrnAC0239 N5N10-methylenetetrahydromethanopterin reductase (321 aa)
 
     
  0.625
Nmar_0627
annotation not available (458 aa)
              0.611
Nmar_1109
PFAM- luciferase family protein; KEGG- afu-AF2411 hypothetical protein (368 aa)
 
     
  0.548
Nmar_0624
Transcription initiation factor IIB; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) (302 aa)
              0.548
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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