STRINGSTRING
Nmar_0690 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0690" - PFAM: tRNA methyltransferase complex GCD14 subunit in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0690PFAM- tRNA methyltransferase complex GCD14 subunit; KEGG- smr-Smar_0877 methyltransferase type 11 (293 aa)    
Predicted Functional Partners:
rlmE
Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit (197 aa)
     
   
  0.793
Nmar_1775
PFAM- putative RNA methylase; DNA methylase N-4/N-6 domain protein; KEGG- mmp-MMP0149 putative methyltransferase (315 aa)
     
 
  0.789
Nmar_1394
PFAM- N2N2-dimethylguanosine tRNA methyltransferase; KEGG- msi-Msm_1031 N2,N2-dimethylguanosine tRNA methyltransferase, Trm1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family (382 aa)
   
   
  0.773
Nmar_1381
PFAM- ribosomal RNA adenine methylase transferase; KEGG- tpt-Tpet_1357 dimethyladenosine transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (234 aa)
   
   
  0.763
nnrD
ADP-dependent (S)-NAD(P)H-hydrate dehydratase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (287 aa)
              0.729
truB
Probable tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (332 aa)
   
   
  0.722
Nmar_0294
PFAM- protein of unknown function Met10; KEGG- smr-Smar_1376 protein of unknown function Met10 (275 aa)
 
 
  0.709
Nmar_0692
PFAM- peptidase M20; peptidase dimerisation domain protein; KEGG- rrs-RoseRS_2549 peptidase M20 (450 aa)
              0.704
rps17e
KEGG- msi-Msm_0833 ribosomal protein S17a; Belongs to the eukaryotic ribosomal protein eS17 family (129 aa)
   
      0.634
rpoH
DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (83 aa)
     
        0.623
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (13%) [HD]