STRINGSTRING
Nmar_0718 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0718" - PFAM: binding-protein-dependent transport systems inner membrane component in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0718PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- pab-PAB1195 oligopeptide transport system permease protein (455 aa)    
Predicted Functional Partners:
Nmar_0719
PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- iho-Igni_1336 binding-protein-dependent transport systems inner membrane component (349 aa)
  0.997
Nmar_1064
KEGG- smr-Smar_1329 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM- oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM- ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART- AAA ATPase (311 aa)
  0.991
Nmar_0652
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG- tma-TM1151 putative oligopeptide transport system ATP-binding protein; TIGRFAM- oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM- ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART- AAA ATPase (322 aa)
  0.986
Nmar_0618
KEGG- iho-Igni_1201 solute binding protein-like protein (820 aa)
 
   
    0.941
rps13
30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement (194 aa)
              0.539
rps4
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (201 aa)
              0.534
Nmar_0720
annotation not available (102 aa)
              0.523
Nmar_1245
PFAM- SMC domain protein; KEGG- sto-ST2108 hypothetical purine NTPase (693 aa)
   
   
  0.513
Nmar_0721
annotation not available (80 aa)
              0.494
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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