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rps8 protein (Nitrosopumilus maritimus) - STRING interaction network
"rps8" - 30S ribosomal protein S8 in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rps830S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (130 aa)    
Predicted Functional Partners:
rpl6
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (185 aa)
 
 
  0.999
rps17
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (107 aa)
 
 
  0.999
rpl22
50S ribosomal protein L22; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (152 aa)
 
 
  0.999
rps4e
PFAM- Ribosomal protein S4E domain protein; Ribosomal protein S4E, central domain protein; KEGG- smr-Smar_1031 ribosomal protein S4E, central; Belongs to the eukaryotic ribosomal protein eS4 family (238 aa)
 
 
  0.999
rpl24
50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (168 aa)
 
 
  0.999
rps19
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (131 aa)
 
 
  0.999
Nmar_0796
PFAM- ribosomal protein S14; KEGG- mka-MK1222 ribosomal protein S14 (59 aa)
 
 
  0.999
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (331 aa)
 
 
  0.999
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (251 aa)
   
 
  0.999
rpl29
PFAM- ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family (68 aa)
   
 
  0.999
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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