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Nmar_0810 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0810" - PFAM: Protein of unknown function DUF171 in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
Nmar_0810PFAM- Protein of unknown function DUF171; KEGG- afu-AF1926 hypothetical protein (270 aa)    
Predicted Functional Partners:
rpl24
50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (168 aa)
 
        0.816
rpl22
50S ribosomal protein L22; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (152 aa)
 
        0.813
Nmar_0811
Proteasome endopeptidase complex; PFAM- 20S proteasome A and B subunits; KEGG- afu-AF0490 proteasome, subunit alpha (245 aa)
 
          0.801
rps4e
PFAM- Ribosomal protein S4E domain protein; Ribosomal protein S4E, central domain protein; KEGG- smr-Smar_1031 ribosomal protein S4E, central; Belongs to the eukaryotic ribosomal protein eS4 family (238 aa)
 
        0.793
rps19
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (131 aa)
 
        0.789
rps17
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (107 aa)
 
        0.788
rpl6
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (185 aa)
 
        0.778
rpl4
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel (271 aa)
 
          0.778
rpl23
50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome (88 aa)
   
        0.764
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (331 aa)
   
   
  0.759
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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