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Nmar_0811 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0811" - Proteasome endopeptidase complex in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Nmar_0811Proteasome endopeptidase complex; PFAM- 20S proteasome A and B subunits; KEGG- afu-AF0490 proteasome, subunit alpha (245 aa)    
Predicted Functional Partners:
Nmar_1314
Proteasome endopeptidase complex; PFAM- 20S proteasome A and B subunits; KEGG- afu-AF0490 proteasome, subunit alpha (240 aa)
   
   
 
0.803
Nmar_0810
PFAM- Protein of unknown function DUF171; KEGG- afu-AF1926 hypothetical protein (270 aa)
 
          0.801
rpl4
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel (271 aa)
 
   
  0.777
rps17
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (107 aa)
 
   
  0.770
rpl6
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (185 aa)
 
      0.767
rps4e
PFAM- Ribosomal protein S4E domain protein; Ribosomal protein S4E, central domain protein; KEGG- smr-Smar_1031 ribosomal protein S4E, central; Belongs to the eukaryotic ribosomal protein eS4 family (238 aa)
 
   
  0.761
rpl24
50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (168 aa)
 
   
  0.745
rpl22
50S ribosomal protein L22; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (152 aa)
 
        0.729
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (331 aa)
 
        0.712
Nmar_1792
TIGRFAM- thermosome; PFAM- chaperonin Cpn60/TCP-1; KEGG- mbn-Mboo_0199 thermosome (570 aa)
   
 
  0.707
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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