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bioD protein (Nitrosopumilus maritimus) - STRING interaction network
"bioD" - ATP-dependent dethiobiotin synthetase BioD in Nitrosopumilus maritimus
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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bioDATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (228 aa)    
Predicted Functional Partners:
Nmar_0822
PFAM- aminotransferase class-III; KEGG- sae-NWMN_2325 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (426 aa)
 
  0.997
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family (326 aa)
 
 
  0.995
Nmar_0819
8-amino-7-oxononanoate synthase; PFAM- aminotransferase class I and II; KEGG- tac-Ta1189 8-amino-7-oxononanoate synthase (374 aa)
 
   
  0.809
Nmar_1343
TIGRFAM- ectoine hydroxylase; PFAM- Phytanoyl-CoA dioxygenase; KEGG- noc-Noc_1560 phytanoyl-CoA dioxygenase (304 aa)
     
        0.545
Nmar_0984
TIGRFAM- biotin--acetyl-CoA-carboxylase ligase; PFAM- biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; KEGG- cth-Cthe_2585 biotin--acetyl-CoA-carboxylase ligase (335 aa)
   
   
  0.502
lysJ
Putative [LysW]-aminoadipate semialdehyde/glutamate semialdehyde transaminase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. LysJ subfamily (393 aa)
 
   
  0.488
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family (310 aa)
 
     
  0.456
Nmar_0138
PFAM- 4’-phosphopantetheinyl transferase; KEGG- mbn-Mboo_1740 holo-acyl-carrier-protein synthase (115 aa)
         
  0.434
thrS
Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction- L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr); Belongs to the class-II aminoacyl-tRNA synthetase family (621 aa)
         
  0.405
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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