STRINGSTRING
Nmar_0853 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0853" - PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0853PFAM- Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG- ter-Tery_0420 glyoxalase/bleomycin resistance protein/dioxygenase (136 aa)    
Predicted Functional Partners:
Nmar_0848
TIGRFAM- threonine dehydratase; PFAM- Pyridoxal-5’-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG- chy-CHY_2459 threonine dehydratase (402 aa)
       
  0.834
Nmar_0389
PFAM- Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG- msm-MSMEG_6743 lactoylglutathione lyase (131 aa)
   
   
    0.825
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate; Belongs to the TrpA family (268 aa)
   
 
  0.818
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (395 aa)
     
 
  0.816
Nmar_0854
PFAM- regulatory protein AsnC/Lrp family; KEGG- pat-Patl_0162 transcriptional regulator, AsnC family (72 aa)
         
  0.738
Nmar_0855
annotation not available (79 aa)
              0.737
Nmar_0856
annotation not available (88 aa)
              0.512
Nmar_0299
PFAM- ribulose-phosphate 3-epimerase; Transketolase domain protein; KEGG- pth-PTH_2750 transketolase, N-terminal subunit (555 aa)
   
   
  0.470
tal
Probable transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily (222 aa)
   
 
  0.413
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (10%) [HD]