STRINGSTRING
Nmar_0874 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0874" - PFAM: ABC transporter related in Nitrosopumilus maritimus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0874PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- nph-NP6124A ABC-type transport system ATP-binding protein (probable substrate phosphonate) 2 (276 aa)    
Predicted Functional Partners:
Nmar_0873
TIGRFAM- phosphonate ABC transporter, inner membrane subunit; PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- bca-BCE_3721 phosphonate ABC transporter, permease protein (265 aa)
 
  0.994
Nmar_0875
TIGRFAM- phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG- ava-Ava_0179 phosphonate-binding periplasmic protein (362 aa)
 
 
  0.986
Nmar_0250
ABC-type phosphate/phosphonate transport system periplasmic component-like protein; KEGG- vpa-VP1753 putative alkylphosphonate ABC tranporter (309 aa)
 
 
  0.905
Nmar_0877
annotation not available (110 aa)
         
  0.572
Nmar_0876
annotation not available (116 aa)
         
  0.572
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (513 aa)
   
          0.568
srp54
Signal recognition particle 54 kDa protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY; Belongs to the GTP-binding SRP family. SRP54 subfamily (442 aa)
   
          0.556
pgk
PFAM- phosphoglycerate kinase; KEGG- mja-MJ0641 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family (408 aa)
   
          0.528
fusA
Elongation factor 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (730 aa)
   
          0.501
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (251 aa)
   
          0.487
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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