STRINGSTRING
Nmar_0878 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0878" - KEGG: nfa:nfa4250 hypothetical protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0878KEGG- nfa-nfa4250 hypothetical protein (242 aa)    
Predicted Functional Partners:
Nmar_0879
annotation not available (71 aa)
              0.838
Nmar_0877
annotation not available (110 aa)
              0.643
Nmar_0876
annotation not available (116 aa)
              0.643
Nmar_0880
KEGG- tko-TK2277 hypothetical protein (209 aa)
              0.600
Nmar_1627
Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen (884 aa)
           
  0.543
Nmar_1267
PFAM- dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; KEGG- rrs-RoseRS_0064 methionine synthase (832 aa)
           
  0.543
Nmar_0958
PFAM- cobalamin B12-binding domain protein; KEGG- tte-TTE2388 methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) (140 aa)
           
  0.543
cbiD
Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A (361 aa)
           
  0.528
Nmar_0881
PFAM- DSBA oxidoreductase; KEGG- tfu-Tfu_1523 similar to protein-disulfide isomerase (214 aa)
              0.517
Nmar_0178
PFAM- pyridoxamine 5’-phosphate oxidase-related FMN-binding; KEGG- rha-RHA1_ro06497 hypothetical protein (133 aa)
   
          0.481
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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