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prf1 protein (Nitrosopumilus maritimus) - STRING interaction network
"prf1" - Peptide chain release factor subunit 1 in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
prf1Peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA (426 aa)    
Predicted Functional Partners:
Nmar_0295
ABC transporter related; PFAM- 4Fe-4S ferredoxin iron-sulfur binding domain protein; ABC transporter related; metal-binding domain in RNase L inhibitor, RLI; SMART- AAA ATPase; KEGG- pab-PAB0824 RNase l inhibitor (595 aa)
   
 
  0.997
Nmar_1254
PFAM- Ribosomal protein L15e; KEGG- smr-Smar_0852 ribosomal protein L15e (154 aa)
   
      0.982
rps4e
PFAM- Ribosomal protein S4E domain protein; Ribosomal protein S4E, central domain protein; KEGG- smr-Smar_1031 ribosomal protein S4E, central; Belongs to the eukaryotic ribosomal protein eS4 family (238 aa)
   
      0.979
Nmar_0391
PFAM- Ribosomal protein L32e; KEGG- pai-PAE2099 ribosomal protein L32 (134 aa)
   
      0.974
rpl10
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (288 aa)
   
      0.974
tuf
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (432 aa)
   
 
  0.971
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (151 aa)
   
      0.970
rps3ae
PFAM- ribosomal protein S3Ae; KEGG- smr-Smar_0844 ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family (203 aa)
   
      0.969
rps19e
30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit (150 aa)
   
      0.969
rps10
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (102 aa)
   
 
  0.968
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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