STRINGSTRING
Nmar_0906 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0906" - KEGG: pub:SAR11_0482 hypothetical protein in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_0906KEGG- pub-SAR11_0482 hypothetical protein (223 aa)    
Predicted Functional Partners:
Nmar_0907
annotation not available (133 aa)
              0.731
Nmar_0445
Uncharacterized protein; KEGG- tva-TVAG_193760 DNA-directed RNA polymerase, omega subunit family protein Pfam- DUF683 TBPIP bZIP_1 Tektin HalX PspA_IM30 Tup_N GBP_C Vicilin_N priB_priC DMPK_coil PLU-1 DUF812 Cortex-I_coil HALZ LMP UVR ATG16 Prefoldin_2 Syntaxin-6_N Myosin_tail_1 Spectrin Tropomyosin DUF904 SpoOE-like Rab5-bind Filament DUF593 HSBP1 TPR_MLP1_2 Nnf1 PROSITE- GLU_RICH LYS_RICH (509 aa)
   
          0.602
Nmar_0616
KEGG- mtp-Mthe_0393 hypothetical protein (1096 aa)
   
          0.561
Nmar_0706
PFAM- peptidase M10A and M12B matrixin and adamalysin; KEGG- mmu-30800 matrix metallopeptidase 20 (enamelysin) (336 aa)
   
          0.552
Nmar_0702
TIGRFAM- PAS sensor protein; PFAM- PAS fold-3 domain protein; PAS fold domain protein; KEGG- sat-SYN_02593 transcriptional regulator GerE family (174 aa)
   
          0.550
Nmar_0754
Uncharacterized protein; KEGG- tva-TVAG_005450 conserved hypothetical protein Pfam- DASH_Dad4 TolA PROSITE- ASP_RICH GLU_RICH LYS_RICH (493 aa)
   
          0.547
Nmar_0908
annotation not available (65 aa)
              0.537
Nmar_1083
annotation not available (100 aa)
   
          0.531
Nmar_1518
PFAM- protein of unknown function DUF437; KEGG- mbu-Mbur_0418 hypothetical protein (151 aa)
   
          0.502
Nmar_0503
KEGG- rha-RHA1_ro00689 hypothetical protein (317 aa)
   
          0.499
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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