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Nmar_0930 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0930" - KEGG: pas:Pars_0790 small subunit ribosomal protein S25e in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Nmar_0930KEGG- pas-Pars_0790 small subunit ribosomal protein S25e (103 aa)    
Predicted Functional Partners:
rpl18
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (160 aa)
     
 
  0.999
rps27e
PFAM- Ribosomal protein S27E; KEGG- pis-Pisl_0434 ribosomal protein S27E (65 aa)
     
 
  0.999
rpl6
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (185 aa)
     
 
  0.999
rps7
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (199 aa)
     
 
  0.999
Nmar_0535
annotation not available (147 aa)
     
 
  0.999
rpl31e
PFAM- Ribosomal protein L31e; KEGG- aor-AO090011000451 predicted protein Pfam- Collagen PROSITE- GLN_RICH GLU_RICH GLY_RICH LYS_RICH; Belongs to the ribosomal protein L31e family (187 aa)
     
 
  0.999
rpl11
50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors (159 aa)
     
 
  0.999
Nmar_0796
PFAM- ribosomal protein S14; KEGG- mka-MK1222 ribosomal protein S14 (59 aa)
     
 
  0.999
rps8e
KEGG- tpe-Tpen_0358 ribosomal protein S8e (127 aa)
     
 
  0.999
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (151 aa)
     
 
  0.999
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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