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Nmar_0980 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_0980" - PFAM: GTP-binding protein HSR1-related in Nitrosopumilus maritimus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Nmar_0980PFAM- GTP-binding protein HSR1-related; TGS domain protein; GTPase of unknown function domain protein; KEGG- sso-SSO0743 GTP binding protein (403 aa)    
Predicted Functional Partners:
Nmar_0981
KEGG- pcl-Pcal_0746 hypothetical protein (121 aa)
              0.744
Nmar_0982
PFAM- CoA-binding domain protein; KEGG- hma-rrnAC1304 hypothetical protein (136 aa)
              0.738
fusA
Elongation factor 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (730 aa)
 
 
  0.729
infB
Probable translation initiation factor IF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 (593 aa)
 
   
  0.678
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (251 aa)
   
   
  0.673
Nmar_1477
Aminoacyl-tRNA synthetase class Ia; KEGG- iho-Igni_0220 valyl-tRNA synthetase (771 aa)
 
   
  0.665
Nmar_0984
TIGRFAM- biotin--acetyl-CoA-carboxylase ligase; PFAM- biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; KEGG- cth-Cthe_2585 biotin--acetyl-CoA-carboxylase ligase (335 aa)
              0.657
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (889 aa)
 
   
  0.652
dnaG
DNA primase DnaG; SMART- Toprim sub domain protein; KEGG- sso-SSO0079 Bacterial-like DNA primase (380 aa)
 
     
  0.648
Nmar_0072
PFAM- protein synthesis factor GTP-binding; Initiation factor eIF2 gamma domain protein; KEGG- afu-AF0592 translation initiation factor eIF-2 gamma subunit (420 aa)
   
        0.647
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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